Worked Examples
Example: CIS Deduction Calculation
A worked example showing how a contractor deducts CIS from a subcontractor's invoice that mixes labour, materials and VAT, and how it appears on the monthly CIS300 return.
Quick answers
How is CIS deducted from a mixed invoice?
Apply the verified CIS rate to the payment after deducting VAT and eligible evidenced direct costs paid by the subcontractor. Labels such as materials or plant hire do not automatically exclude mark-ups or owned-plant costs. The example assumes £1,500 eligible direct costs and a 20% verified rate, giving an £800 deduction.
When does VAT reverse charge apply with CIS?
Most CIS-registered services between two VAT-registered, CIS-registered businesses fall under the VAT domestic reverse charge. The supplier doesn't add VAT; the customer accounts for it on their own VAT return as both output and input — input recovery is subject to normal rules, so the net effect need not be zero. End-user and other reverse-charge conditions must also be checked.
Scenario
Mainstream Builders Ltd (the contractor) hires Sparky Joe (a registered subcontractor) to wire a new commercial unit in May 2025. Joe's invoice:
| Line | Net | VAT (reverse charge) |
|---|---|---|
| Labour | £4,000 | £800 (reverse charge — reported by customer) |
| Cable & accessories | £1,200 | £240 |
| Plant hire | £300 | £60 |
| Total invoice | £5,500 | £1,100 (reverse charge) |
(Assume the supply meets all domestic reverse-charge conditions, including that the customer is not an end user; registration alone does not establish that the VAT domestic reverse charge applies — the customer accounts for the VAT.)
Step 1: Identify deductible amount
Assume the materials and hired-plant figures are evidenced direct costs paid by Joe, with no mark-up. Deduct allowable direct costs and VAT from the payment before applying CIS; not every amount labelled materials or plant is excluded.
- Deductible (labour): £4,000
- Excluded (materials + plant + VAT): £1,200 + £300 + £1,100 = £2,600
Step 2: Apply the deduction rate
Joe is registered → 20% rate.
CIS deduction = £4,000 × 20% = £800
Step 3: Calculate the payment to Joe
| Component | Amount |
|---|---|
| Net invoice (excluding VAT) | £5,500 |
| Less CIS deduction on labour | (£800) |
| Plus VAT | £0 (reverse charge — Joe doesn't charge VAT) |
| Pay Joe | £4,700 |
Mainstream Builders accounts for the £1,100 VAT itself on its own VAT return (input £1,100, output £1,100 — net zero).
Step 4: Issue a Payment & Deduction Statement
Within 14 days of the end of the tax month, Mainstream gives Joe a written statement showing:
- Gross amount £5,500 (or £4,000 labour, £1,500 materials/plant, depending on convention)
- Deduction £800
- Verification number
- Period covered
Step 5: CIS300 monthly return
The May tax month runs 6 May to 5 June 2025. Mainstream files the CIS300 by 19 June 2025, listing every subcontractor paid in that period — including:
- Joe's UTR and verification reference
- Total payments £5,500
- Materials £1,500
- Deduction £800
Step 6: Pay HMRC
The £800 deduction must reach HMRC by:
- 22 June 2025 (electronic payment) or
- 19 June 2025 (postal cheque)
If Mainstream's total monthly PAYE/CIS bill is under £1,500, it can pay quarterly — but most contractors pay monthly.
Step 7: How Joe reclaims the £800
Sparky Joe is self-employed, so the £800 is offset against his Self Assessment income tax + Class 4 NI bill for 2025/26. Excess deductions are refunded after his SA return is processed.
If Joe traded through a limited company, claim CIS deductions through EPS against PAYE liabilities and follow HMRC’s excess-deduction process. Do not claim them through CT600. See HMRC CIS deductions.
Common mistakes shown by this example
- Deducting CIS from the gross £5,500 (would be £1,100, overpaying by £300)
- Forgetting the reverse charge and adding VAT on top
- Issuing the payment statement late (penalty £100 per occurrence)
- Filing the CIS300 a day late — automatic £100 penalty
General guidance, not tax advice. Speak to a qualified accountant for advice tailored to your situation. Figures relate to the 2025/26 UK tax year. Source: HMRC, gov.uk.
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